Mercurial > pylearn
view linear_regression.py @ 388:98ca97cc9910
Debugging simple AA
author | Joseph Turian <turian@gmail.com> |
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date | Tue, 08 Jul 2008 17:41:26 -0400 |
parents | 74b402b5a81b |
children | efb797c5efc0 |
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""" Implementation of linear regression, with or without L2 regularization. This is one of the simplest example of L{learner}, and illustrates the use of theano. """ from pylearn import OfflineLearningAlgorithm from theano import tensor as T from theano.scalar import as_scalar from common.autoname import AutoName class LinearRegression(OfflineLearningAlgorithm): """ Implement linear regression, with or without L2 regularization (the former is called Ridge Regression and the latter Ordinary Least Squares). The predictor parameters are obtained analytically from the training set. Training can proceed sequentially (with multiple calls to update with different disjoint subsets of the training sets). After each call to update the predictor is ready to be used (and optimized for the union of all the training sets passed to update since construction or since the last call to forget). For each (input[t],output[t]) pair in a minibatch,:: output_t = b + W * input_t where b and W are obtained by minimizing:: L2_regularizer sum_{ij} W_{ij}^2 + sum_t ||output_t - target_t||^2 Let X be the whole training set inputs matrix (one input example per row), with the first column full of 1's, and Let Y the whole training set targets matrix (one example's target vector per row). Let theta = the matrix with b in its first column and W in the others, then each theta[:,i] is the solution of the linear system:: XtX * theta[:,i] = XtY[:,i] where XtX is a (n_inputs+1)x(n_inputs+1) matrix containing X'*X plus L2_regularizer on the diagonal except at (0,0), and XtY is a (n_inputs+1)*n_outputs matrix containing X'*Y. The dataset fields expected and produced by the learning algorithm and the trained model are the following: - Input and output dataset fields (example-wise quantities): - 'input' (always expected as an input_dataset field) - 'target' (always expected by the learning algorithm, optional for learned model) - 'output' (always produced by learned model) - 'squared_error' (optionally produced by learned model if 'target' is provided) = example-wise squared error """ def __init__(self, L2_regularizer=0): self.predictor = LinearPredictor(None,None self.L2_regularizer=L2_regularizer self._XtX = T.matrix('XtX') self._XtY = T.matrix('XtY') self._extended_input = T.prepend_one_to_each_row(self._input) class LinearPredictorEquations(AutoName): inputs = T.matrix() # minibatchsize x n_inputs targets = T.matrix() # minibatchsize x n_outputs theta = T.matrix() # (n_inputs+1) x n_outputs b = theta[0] Wt = theta[1:,:] outputs = T.dot(inputs,Wt) + b # minibatchsize x n_outputs squared_errors = T.sum(T.sqr(targets-outputs),axis=1) __compiled = False @classmethod def compile(cls,linker='c|py'): if cls.__compiled: return def fn(input_vars,output_vars): return staticmethod(theano.function(input_vars,output_vars, linker=linker)) cls.compute_outputs = fn([inputs,theta],[outputs]) cls.compute_errors = fn([outputs,targets],[squared_errors]) cls.__compiled = True def __init__(self) self.compile() class LinearRegressionEquations(LinearPredictorEquations): P = LinearPredictorEquations XtX = T.matrix() # (n_inputs+1) x (n_inputs+1) XtY = T.matrix() # (n_inputs+1) x n_outputs extended_input = T.prepend_scalar_to_each_row(1.,P.inputs) new_XtX = add_inplace(XtX,T.dot(extended_input.T,extended_input)) new_XtY = add_inplace(XtY,T.dot(extended_input.T,P.targets)) new_theta = T.Cholesky_solve_inplace(P.theta,XtX,XtY) # solve linear system XtX theta = XtY class LinearPredictor(object): """ A linear predictor has parameters theta (a bias vector and a weight matrix) it can use to make a linear prediction (according to the LinearPredictorEquations). It can compute its output (bias + weight * input) and a squared error (||output - target||^2). """ def __init__(self, theta): self.theta=theta self.n_inputs=theta.shape[0]-1 self.n_outputs=theta.shape[1] self.predict_equations = LinearPredictorEquations() def compute_outputs(self,inputs): return self.predict_equations.compute_outputs(inputs,self.theta) def compute_errors(self,inputs,targets): return self.predict_equations.compute_errors(self.compute_outputs(inputs),targets) def compute_outputs_and_errors(self,inputs,targets): outputs = self.compute_outputs(inputs) return [outputs,self.predict_equations.compute_errors(outputs,targets)] def __call__(self,dataset,output_fieldnames=None,cached_output_dataset=False): assert dataset.hasFields(["input"]) if output_fieldnames is None: if dataset.hasFields(["target"]): output_fieldnames = ["output","squared_error"] else: output_fieldnames = ["output"] output_fieldnames.sort() if output_fieldnames == ["squared_error"]: f = self.compute_errors elif output_fieldnames == ["output"]: f = self.compute_outputs elif output_fieldnames == ["output","squared_error"]: f = self.compute_outputs_and_errors else: raise ValueError("unknown field(s) in output_fieldnames: "+str(output_fieldnames)) ds=ApplyFunctionDataSet(dataset,f,output_fieldnames) if cached_output_dataset: return CachedDataSet(ds) else: return ds self._XtX = T.matrix('XtX') self._XtY = T.matrix('XtY') self._extended_input = T.prepend_one_to_each_row(self._input) self._output = T.dot(self._input,self._W.T) + self._b # (n_examples , n_outputs) matrix self._squared_error = T.sum_within_rows(T.sqr(self._output-self._target)) # (n_examples ) vector self._regularizer = self._L2_regularizer * T.dot(self._W,self._W) self._new_XtX = add_inplace(self._XtX,T.dot(self._extended_input.T,self._extended_input)) self._new_XtY = add_inplace(self._XtY,T.dot(self._extended_input.T,self._target)) self._new_theta = T.solve_inplace(self._theta,self._XtX,self._XtY) def allocate(self,dataset): dataset_n_inputs = dataset["input"].shape[1] dataset_n_outputs = dataset["target"].shape[1] if not self._n_inputs: self._n_inputs = dataset_n_inputs self._n_outputs = dataset_n_outputs self.XtX = numpy.zeros((1+self._n_inputs,1+self._n_inputs)) self.XtY = numpy.zeros((1+self._n_inputs,self._n_outputs)) self.theta = numpy.zeros((self._n_outputs,1+self._n_inputs)) self.forget() elif self._n_inputs!=dataset_n_inputs or self._n_outputs!=dataset_n_outputs: # if the input or target changes dimension on the fly, we resize and forget everything self.forget() def forget(self): if self._n_inputs and self._n_outputs: self.XtX.resize((1+self.n_inputs,1+self.n_inputs)) self.XtY.resize((1+self.n_inputs,self.n_outputs)) self.XtX.data[:,:]=0 self.XtY.data[:,:]=0 numpy.diag(self.XtX.data)[1:]=self.L2_regularizer def __call__(self,dataset):