Mercurial > pylearn
view test_dataset.py @ 96:352910e0dbf5
added test and some restructuring for futur use
author | Frederic Bastien <bastienf@iro.umontreal.ca> |
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date | Tue, 06 May 2008 10:53:21 -0400 |
parents | 9c8f3c9c247b |
children | 574f4db76022 |
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#!/bin/env python from dataset import * from math import * import numpy def have_raised(to_eval): have_thrown = False try: eval(to_eval) except : have_thrown = True return have_thrown def test1(): print "test1" global a,ds a = numpy.random.rand(10,4) print a ds = ArrayDataSet(a,{'x':slice(3),'y':3,'z':[0,2]}) print "len(ds)=",len(ds) assert(len(ds)==10) print "example 0 = ",ds[0] # assert print "x=",ds["x"] print "x|y" for x,y in ds("x","y"): print x,y minibatch_iterator = ds.minibatches(fieldnames=['z','y'],n_batches=1,minibatch_size=3,offset=4) minibatch = minibatch_iterator.__iter__().next() print "minibatch=",minibatch for var in minibatch: print "var=",var print "take a slice and look at field y",ds[1:6:2]["y"] def test_ArrayDataSet(): #don't test stream #tested only with float value #test with y too #test missing value def test_iterate_over_examples(array,ds): #not in doc!!! i=0 for example in range(len(ds)): assert (ds[example]['x']==a[example][:3]).all() assert ds[example]['y']==a[example][3] assert (ds[example]['z']==a[example][[0,2]]).all() i+=1 assert i==len(ds) del example,i # - for example in dataset: i=0 for example in ds: assert len(example)==3 assert (example['x']==array[i][:3]).all() assert example['y']==array[i][3] assert (example['z']==array[i][0:3:2]).all() assert (numpy.append(example['x'],example['y'])==array[i]).all() i+=1 assert i==len(ds) del example,i # - for val1,val2,... in dataset: i=0 for x,y,z in ds: assert (x==array[i][:3]).all() assert y==array[i][3] assert (z==array[i][0:3:2]).all() assert (numpy.append(x,y)==array[i]).all() i+=1 assert i==len(ds) del x,y,z,i # - for example in dataset(field1, field2,field3, ...): i=0 for example in ds('x','y','z'): assert len(example)==3 assert (example['x']==array[i][:3]).all() assert example['y']==array[i][3] assert (example['z']==array[i][0:3:2]).all() assert (numpy.append(example['x'],example['y'])==array[i]).all() i+=1 assert i==len(ds) del example,i i=0 for example in ds('y','x'): assert len(example)==2 assert (example['x']==array[i][:3]).all() assert example['y']==array[i][3] assert (numpy.append(example['x'],example['y'])==array[i]).all() i+=1 assert i==len(ds) del example,i # - for val1,val2,val3 in dataset(field1, field2,field3): i=0 for x,y,z in ds('x','y','z'): assert (x==array[i][:3]).all() assert y==array[i][3] assert (z==array[i][0:3:2]).all() assert (numpy.append(x,y)==array[i]).all() i+=1 assert i==len(ds) del x,y,z,i i=0 for y,x in ds('y','x',): assert (x==array[i][:3]).all() assert y==array[i][3] assert (numpy.append(x,y)==array[i]).all() i+=1 assert i==len(ds) del x,y,i # - for minibatch in dataset.minibatches([field1, field2, ...],minibatch_size=N): i=0 for minibatch in ds.minibatches(['x','z'], minibatch_size=3): assert len(minibatch)==2 assert len(minibatch[0])==3 assert len(minibatch[1])==3 assert (minibatch[0][:,0:3:2]==minibatch[1]).all() i+=1 #assert i==#??? What shoud be the value? print i del minibatch,i i=0 for minibatch in ds.minibatches(['x','y'], minibatch_size=3): assert len(minibatch)==2 assert len(minibatch[0])==3 assert len(minibatch[1])==3 for id in range(3): assert (numpy.append(minibatch[0][id],minibatch[1][id])==a[i]).all() i+=1 #assert i==#??? What shoud be the value? print i del minibatch,i,id # - for mini1,mini2,mini3 in dataset.minibatches([field1, field2, field3], minibatch_size=N): i=0 for x,z in ds.minibatches(['x','z'], minibatch_size=3): assert len(x)==3 assert len(z)==3 assert (x[:,0:3:2]==z).all() i+=1 #assert i==#??? What shoud be the value? print i del x,z,i i=0 for x,y in ds.minibatches(['x','y'], minibatch_size=3): assert len(x)==3 assert len(y)==3 for id in range(3): assert (numpy.append(x[id],y[id])==a[i]).all() i+=1 #assert i==#??? What shoud be the value? print i del x,y,i,id #not in doc i=0 for x,y in ds.minibatches(['x','y'],n_batches=1,minibatch_size=3,offset=4): assert len(x)==3 assert len(y)==3 for id in range(3): assert (numpy.append(x[id],y[id])==a[i+4]).all() i+=1 assert i==3 del x,y,i,id i=0 for x,y in ds.minibatches(['x','y'],n_batches=2,minibatch_size=3,offset=4): assert len(x)==3 assert len(y)==3 for id in range(3): assert (numpy.append(x[id],y[id])==a[i+4]).all() i+=1 assert i==6 del x,y,i,id i=0 for x,y in ds.minibatches(['x','y'],n_batches=10,minibatch_size=3,offset=4): assert len(x)==3 assert len(y)==3 for id in range(3): assert (numpy.append(x[id],y[id])==a[i+4]).all() i+=1 assert i==6 del x,y,i,id def test_ds_iterator(array,iterator1,iterator2,iterator3): i=0 for x,y in iterator1: assert (x==array[i][:3]).all() assert y==array[i][3] assert (numpy.append(x,y)==array[i]).all() i+=1 assert i==len(ds) i=0 for y,z in iterator2: assert y==array[i][3] assert (z==array[i][0:3:2]).all() i+=1 assert i==len(ds) i=0 for x,y,z in iterator3: assert (x==array[i][:3]).all() assert y==array[i][3] assert (z==array[i][0:3:2]).all() assert (numpy.append(x,y)==array[i]).all() i+=1 assert i==len(ds) print "test_ArrayDataSet" a = numpy.random.rand(10,4) ds = ArrayDataSet(a,{'x':slice(3),'y':3,'z':[0,2]})###???tuple not tested ds = ArrayDataSet(a,LookupList(['x','y','z'],[slice(3),3,[0,2]]))###???tuple not tested assert len(ds)==10 #assert ds==a? should this work? test_iterate_over_examples(a, ds) # - for val1,val2,val3 in dataset(field1, field2,field3): test_ds_iterator(a,ds('x','y'),ds('y','z'),ds('x','y','z')) assert have_raised("ds['h']") # h is not defined... assert have_raised("ds[['h']]") # h is not defined... assert len(ds.fields())==3 for field in ds.fields(): for field_value in field: # iterate over the values associated to that field for all the ds examples pass for field in ds('x','z').fields(): pass for field in ds.fields('x','y'): pass for field_examples in ds.fields(): for example_value in field_examples: pass assert ds == ds.fields().examples() def test_ds(orig,ds,index): i=0 assert len(ds)==len(index) for x,z,y in ds('x','z','y'): assert (orig[index[i]]['x']==a[index[i]][:3]).all() assert (orig[index[i]]['x']==x).all() assert orig[index[i]]['y']==a[index[i]][3] assert orig[index[i]]['y']==y assert (orig[index[i]]['z']==a[index[i]][0:3:2]).all() assert (orig[index[i]]['z']==z).all() i+=1 del i ds[0] if len(ds)>2: ds[:1] ds[1:1] ds[1:1:1] if len(ds)>5: ds[[1,2,3]] for x in ds: pass #ds[:n] returns a dataset with the n first examples. ds2=ds[:3] test_ds(ds,ds2,index=[0,1,2]) #ds[i1:i2:s]# returns a ds with the examples i1,i1+s,...i2-s. ds2=ds[1:7:2] test_ds(ds,ds2,[1,3,5]) #ds[[i1,i2,...in]]# returns a ds with examples i1,i2,...in. ds2=ds[[4,7,2,8]] test_ds(ds,ds2,[4,7,2,8]) #ds[i1,i2,...]# should we accept???? #ds[fieldname]# an iterable over the values of the field fieldname across #the ds (the iterable is obtained by default by calling valuesVStack #over the values for individual examples). #ds.<property># returns the value of a property associated with #the name <property>. The following properties should be supported: # - 'description': a textual description or name for the ds # - 'fieldtypes': a list of types (one per field) #* ds1 | ds2 | ds3 == ds.hstack([ds1,ds2,ds3]) #* ds1 & ds2 & ds3 == ds.vstack([ds1,ds2,ds3]) # for (x,y) in (ds('x','y'),a): #???don't work # haven't found a variant that work. # assert numpy.append(x,y)==z def test_LookupList(): #test only the example in the doc??? print "test_LookupList" example = LookupList(['x','y','z'],[1,2,3]) example['x'] = [1, 2, 3] # set or change a field x, y, z = example x = example[0] x = example["x"] assert example.keys()==['x','y','z'] assert example.values()==[[1,2,3],2,3] assert example.items()==[('x',[1,2,3]),('y',2),('z',3)] example.append_keyval('u',0) # adds item with name 'u' and value 0 assert len(example)==4 # number of items = 4 here example2 = LookupList(['v','w'], ['a','b']) example3 = LookupList(['x','y','z','u','v','w'], [[1, 2, 3],2,3,0,'a','b']) assert example+example2==example3 assert have_raised("example+example") def test_ApplyFunctionDataSet(): print "test_ApplyFunctionDataSet" raise NotImplementedError() def test_CacheDataSet(): print "test_CacheDataSet" raise NotImplementedError() def test_FieldsSubsetDataSet(): print "test_FieldsSubsetDataSet" raise NotImplementedError() def test_DataSetFields(): print "test_DataSetFields" raise NotImplementedError() def test_MinibatchDataSet(): print "test_MinibatchDataSet" raise NotImplementedError() def test_HStackedDataSet(): print "test_HStackedDataSet" raise NotImplementedError() def test_VStackedDataSet(): print "test_VStackedDataSet" raise NotImplementedError() def test_ArrayFieldsDataSet(): print "test_ArrayFieldsDataSet" raise NotImplementedError() test1() test_LookupList() test_ArrayDataSet()