Mercurial > pylearn
annotate algorithms/logistic_regression.py @ 536:c6563c629984
Moved word preprocessing out
author | Joseph Turian <turian@gmail.com> |
---|---|
date | Thu, 20 Nov 2008 06:11:52 -0500 |
parents | b267a8000f92 |
children |
rev | line source |
---|---|
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
1 import theano |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
2 from theano import tensor as T |
495 | 3 from theano.tensor import nnet |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
4 from theano.compile import module |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
5 from theano import printing, pprint |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
6 from theano import compile |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
7 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
8 import numpy as N |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
9 |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
10 class LogRegInstanceType(module.FancyModuleInstance): |
519
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
11 def initialize(self, n_in, n_out, lr, seed): |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
12 #self.component is the LogisticRegressionTemplate instance that built this guy. |
501
4fb6f7320518
N-class logistic regression top-layer works
Joseph Turian <turian@gmail.com>
parents:
499
diff
changeset
|
13 """ |
4fb6f7320518
N-class logistic regression top-layer works
Joseph Turian <turian@gmail.com>
parents:
499
diff
changeset
|
14 @todo: Remove seed. Used only to keep Stacker happy. |
4fb6f7320518
N-class logistic regression top-layer works
Joseph Turian <turian@gmail.com>
parents:
499
diff
changeset
|
15 """ |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
16 |
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
17 self.w = N.zeros((n_in, n_out)) |
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
18 self.b = N.zeros(n_out) |
519
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
19 self.lr = lr |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
20 self.__hide__ = ['params'] |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
21 self.input_dimension = n_in |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
22 self.output_dimension = n_out |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
23 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
24 class Module_Nclass(module.FancyModule): |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
25 InstanceType = LogRegInstanceType |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
26 |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
27 def __init__(self, x=None, targ=None, w=None, b=None, lr=None, regularize=False): |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
28 super(Module_Nclass, self).__init__() #boilerplate |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
29 |
519
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
30 self.x = module.Member(x) if x is not None else T.matrix('input') |
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
31 self.targ = module.Member(targ) if targ is not None else T.lvector() |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
32 |
519
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
33 self.w = module.Member(w) if w is not None else module.Member(T.dmatrix()) |
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
34 self.b = module.Member(b) if b is not None else module.Member(T.dvector()) |
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
35 self.lr = module.Member(lr) if lr is not None else module.Member(T.dscalar()) |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
36 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
37 self.params = [p for p in [self.w, self.b] if p.owner is None] |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
38 |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
39 linear_output = T.dot(self.x, self.w) + self.b |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
40 |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
41 (xent, softmax, max_pr, argmax) = nnet.crossentropy_softmax_max_and_argmax_1hot( |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
42 linear_output, self.targ) |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
43 sum_xent = T.sum(xent) |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
44 |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
45 self.softmax = softmax |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
46 self.argmax = argmax |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
47 self.max_pr = max_pr |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
48 self.sum_xent = sum_xent |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
49 |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
50 # Softmax being computed directly. |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
51 softmax_unsupervised = nnet.softmax(linear_output) |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
52 self.softmax_unsupervised = softmax_unsupervised |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
53 |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
54 #compatibility with current implementation of stacker/daa or something |
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
55 #TODO: remove this, make a wrapper |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
56 self.cost = self.sum_xent |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
57 self.input = self.x |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
58 # TODO: I want to make output = linear_output. |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
59 self.output = self.softmax_unsupervised |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
60 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
61 #define the apply method |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
62 self.pred = T.argmax(linear_output, axis=1) |
497 | 63 self.apply = module.Method([self.input], self.pred) |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
64 |
503
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
65 self.validate = module.Method([self.input, self.targ], [self.cost, self.argmax, self.max_pr]) |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
66 self.softmax_output = module.Method([self.input], self.softmax_unsupervised) |
c7ce66b4e8f4
Extensions to algorithms, and some cleanup (by defining linear_output result).
Joseph Turian <turian@gmail.com>
parents:
502
diff
changeset
|
67 |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
68 if self.params: |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
69 gparams = T.grad(sum_xent, self.params) |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
70 |
497 | 71 self.update = module.Method([self.input, self.targ], sum_xent, |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
72 updates = dict((p, p - self.lr * g) for p, g in zip(self.params, gparams))) |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
73 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
74 class Module(module.FancyModule): |
499
a419edf4e06c
removed unpicklable nested classes in logistic regression
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
497
diff
changeset
|
75 InstanceType = LogRegInstanceType |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
76 |
497 | 77 def __init__(self, input=None, targ=None, w=None, b=None, lr=None, regularize=False): |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
78 super(Module, self).__init__() #boilerplate |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
79 |
519
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
80 self.input = module.Member(input) if input is not None else T.matrix('input') |
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
81 self.targ = module.Member(targ) if targ is not None else T.lcol() |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
82 |
519
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
83 self.w = module.Member(w) if w is not None else module.Member(T.dmatrix()) |
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
84 self.b = module.Member(b) if b is not None else module.Member(T.dvector()) |
b267a8000f92
Added theano.Member to Member variables which were passed in during initialization.
Joseph Turian <turian@iro.umontreal.ca>
parents:
503
diff
changeset
|
85 self.lr = module.Member(lr) if lr is not None else module.Member(T.dscalar()) |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
86 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
87 self.params = [p for p in [self.w, self.b] if p.owner is None] |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
88 |
502 | 89 output = nnet.sigmoid(T.dot(self.x, self.w) + self.b) |
497 | 90 xent = -self.targ * T.log(output) - (1.0 - self.targ) * T.log(1.0 - output) |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
91 sum_xent = T.sum(xent) |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
92 |
497 | 93 self.output = output |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
94 self.xent = xent |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
95 self.sum_xent = sum_xent |
491
180d125dc7e2
made logistic_regression classes compatible with stacker
Olivier Breuleux <breuleuo@iro.umontreal.ca>
parents:
476
diff
changeset
|
96 self.cost = sum_xent |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
97 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
98 #define the apply method |
497 | 99 self.pred = (T.dot(self.input, self.w) + self.b) > 0.0 |
100 self.apply = module.Method([self.input], self.pred) | |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
101 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
102 #if this module has any internal parameters, define an update function for them |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
103 if self.params: |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
104 gparams = T.grad(sum_xent, self.params) |
497 | 105 self.update = module.Method([self.input, self.targ], sum_xent, |
470
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
106 updates = dict((p, p - self.lr * g) for p, g in zip(self.params, gparams))) |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
107 |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
108 class Learner(object): |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
109 """TODO: Encapsulate the algorithm for finding an optimal regularization coefficient""" |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
110 pass |
bd937e845bbb
new stuff: algorithms/logistic_regression, datasets/MNIST
James Bergstra <bergstrj@iro.umontreal.ca>
parents:
diff
changeset
|
111 |