Mercurial > pylearn
annotate _test_dataset.py @ 83:c0f211213a58
bugfix
author | Frederic Bastien <bastienf@iro.umontreal.ca> |
---|---|
date | Mon, 05 May 2008 11:14:28 -0400 |
parents | 46c5c90019c2 |
children | 5b3afda2f1ad |
rev | line source |
---|---|
4 | 1 from dataset import * |
2 from math import * | |
3 import unittest | |
4 | |
5 def _sum_all(a): | |
6 s=a | |
7 while isinstance(s,numpy.ndarray): | |
8 s=sum(s) | |
9 return s | |
10 | |
11 class T_arraydataset(unittest.TestCase): | |
12 def setUp(self): | |
13 numpy.random.seed(123456) | |
14 | |
17
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
15 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
16 def test_ctor_len(self): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
17 n = numpy.random.rand(8,3) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
18 a=ArrayDataSet(n) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
19 self.failUnless(a.data is n) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
20 self.failUnless(a.fields is None) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
21 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
22 self.failUnless(len(a) == n.shape[0]) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
23 self.failUnless(a[0].shape == (n.shape[1],)) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
24 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
25 def test_iter(self): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
26 arr = numpy.random.rand(8,3) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
27 a=ArrayDataSet(data=arr,fields={"x":slice(2),"y":slice(1,3)}) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
28 for i, example in enumerate(a): |
21
fdf0abc490f7
Adapted _test_dataset.py to changes in LookupList
bengioy@bengiomac.local
parents:
19
diff
changeset
|
29 self.failUnless(numpy.all( example['x'] == arr[i,:2])) |
fdf0abc490f7
Adapted _test_dataset.py to changes in LookupList
bengioy@bengiomac.local
parents:
19
diff
changeset
|
30 self.failUnless(numpy.all( example['y'] == arr[i,1:3])) |
17
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
31 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
32 def test_zip(self): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
33 arr = numpy.random.rand(8,3) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
34 a=ArrayDataSet(data=arr,fields={"x":slice(2),"y":slice(1,3)}) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
35 for i, x in enumerate(a.zip("x")): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
36 self.failUnless(numpy.all( x == arr[i,:2])) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
37 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
38 def test_minibatch_basic(self): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
39 arr = numpy.random.rand(10,4) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
40 a=ArrayDataSet(data=arr,fields={"x":slice(2),"y":slice(1,4)}) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
41 for i, mb in enumerate(a.minibatches(minibatch_size=2)): #all fields |
21
fdf0abc490f7
Adapted _test_dataset.py to changes in LookupList
bengioy@bengiomac.local
parents:
19
diff
changeset
|
42 self.failUnless(numpy.all( mb['x'] == arr[i*2:i*2+2,0:2])) |
fdf0abc490f7
Adapted _test_dataset.py to changes in LookupList
bengioy@bengiomac.local
parents:
19
diff
changeset
|
43 self.failUnless(numpy.all( mb['y'] == arr[i*2:i*2+2,1:4])) |
7
6f8f338686db
Moved iterating counter into a FiniteDataSetIterator to allow embedded iterations and multiple threads iterating at the same time on a dataset.
bengioy@bengiomac.local
parents:
6
diff
changeset
|
44 |
17
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
45 def test_getattr(self): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
46 arr = numpy.random.rand(10,4) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
47 a=ArrayDataSet(data=arr,fields={"x":slice(2),"y":slice(1,4)}) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
48 a_y = a.y |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
49 self.failUnless(numpy.all( a_y == arr[:,1:4])) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
50 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
51 def test_minibatch_wraparound_even(self): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
52 arr = numpy.random.rand(10,4) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
53 arr2 = ArrayDataSet.Iterator.matcat(arr,arr) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
54 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
55 a=ArrayDataSet(data=arr,fields={"x":slice(2),"y":slice(1,4)}) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
56 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
57 #print arr |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
58 for i, x in enumerate(a.minibatches(["x"], minibatch_size=2, n_batches=8)): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
59 #print 'x' , x |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
60 self.failUnless(numpy.all( x == arr2[i*2:i*2+2,0:2])) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
61 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
62 def test_minibatch_wraparound_odd(self): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
63 arr = numpy.random.rand(10,4) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
64 arr2 = ArrayDataSet.Iterator.matcat(arr,arr) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
65 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
66 a=ArrayDataSet(data=arr,fields={"x":slice(2),"y":slice(1,4)}) |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
67 |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
68 for i, x in enumerate(a.minibatches(["x"], minibatch_size=3, n_batches=6)): |
759d17112b23
more comments, looping ArrayDataSet iterator, bugfixes to lookup_list, more tests
bergstrj@iro.umontreal.ca
parents:
11
diff
changeset
|
69 self.failUnless(numpy.all( x == arr2[i*3:i*3+3,0:2])) |
19 | 70 |
26
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
71 |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
72 class T_renamingdataset(unittest.TestCase): |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
73 def setUp(self): |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
74 numpy.random.seed(123456) |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
75 |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
76 |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
77 def test_hasfield(self): |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
78 n = numpy.random.rand(3,8) |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
79 a=ArrayDataSet(data=n,fields={"x":slice(2),"y":slice(1,4),"z":slice(4,6)}) |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
80 b=a.rename({'xx':'x','zz':'z'}) |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
81 self.failUnless(b.hasFields('xx','zz') and not b.hasFields('x') and not b.hasFields('y')) |
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
82 |
29
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
83 class T_applyfunctiondataset(unittest.TestCase): |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
84 def setUp(self): |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
85 numpy.random.seed(123456) |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
86 |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
87 def test_function(self): |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
88 n = numpy.random.rand(3,8) |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
89 a=ArrayDataSet(data=n,fields={"x":slice(2),"y":slice(1,4),"z":slice(4,6)}) |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
90 b=a.apply_function(lambda x,y: x+y,x+1, ['x','y'], ['x+y','x+1'], False,False,False) |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
91 print b.fieldNames() |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
92 print b('x+y') |
46c5c90019c2
Changed apply_function so that it propagates methods of the source.
bengioy@grenat.iro.umontreal.ca
parents:
28
diff
changeset
|
93 |
26
672fe4b23032
Fixed dataset errors so that _test_dataset.py works again.
bengioy@grenat.iro.umontreal.ca
parents:
22
diff
changeset
|
94 |
4 | 95 if __name__ == '__main__': |
96 unittest.main() | |
97 |