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annotate deep/deep_mlp/logistic_sgd.py @ 626:75dbbe409578

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Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
author fsavard
date Wed, 16 Mar 2011 13:43:32 -0400
parents
children
rev   line source
626
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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1 import numpy, time, cPickle, gzip, sys, os
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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2
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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3 import theano
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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4 import theano.tensor as T
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5
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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6 class LogisticRegression(object):
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7 def __init__(self, input, n_in, n_out):
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8 self.W = theano.shared(value=numpy.zeros((n_in,n_out),
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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9 dtype = theano.config.floatX),
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10 name='W')
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11 self.b = theano.shared(value=numpy.zeros((n_out,),
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12 dtype = theano.config.floatX),
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13 name='b')
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14
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15 self.p_y_given_x = T.nnet.softmax(T.dot(input, self.W)+self.b)
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16
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17 self.y_pred=T.argmax(self.p_y_given_x, axis=1)
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18
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19 self.params = [self.W, self.b]
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20
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21 def negative_log_likelihood(self, y):
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22 return -T.mean(T.log(self.p_y_given_x)[T.arange(y.shape[0]),y])
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23
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24
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25 def errors(self, y):
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26 if y.ndim != self.y_pred.ndim:
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27 raise TypeError('y should have the same shape as self.y_pred',
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28 ('y', target.type, 'y_pred', self.y_pred.type))
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29
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30 if y.dtype.startswith('int'):
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31 return T.mean(T.neq(self.y_pred, y))
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32 else:
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33 raise NotImplementedError()
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34
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35
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36 def load_data(dataset):
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37 ''' Loads the dataset
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38
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39 :type dataset: string
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40 :param dataset: the path to the dataset (here MNIST)
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41 '''
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42
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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43 #############
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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44 # LOAD DATA #
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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45 #############
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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46 print '... loading data'
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47
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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48 # Load the dataset
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49 f = gzip.open(dataset,'rb')
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50 train_set, valid_set, test_set = cPickle.load(f)
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51 f.close()
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52
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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53
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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54 def shared_dataset(data_xy):
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55 """ Function that loads the dataset into shared variables
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56
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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57 The reason we store our dataset in shared variables is to allow
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58 Theano to copy it into the GPU memory (when code is run on GPU).
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59 Since copying data into the GPU is slow, copying a minibatch everytime
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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60 is needed (the default behaviour if the data is not in a shared
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61 variable) would lead to a large decrease in performance.
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62 """
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63 data_x, data_y = data_xy
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64 shared_x = theano.shared(numpy.asarray(data_x, dtype=theano.config.floatX))
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65 shared_y = theano.shared(numpy.asarray(data_y, dtype=theano.config.floatX))
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66 # When storing data on the GPU it has to be stored as floats
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67 # therefore we will store the labels as ``floatX`` as well
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68 # (``shared_y`` does exactly that). But during our computations
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69 # we need them as ints (we use labels as index, and if they are
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70 # floats it doesn't make sense) therefore instead of returning
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71 # ``shared_y`` we will have to cast it to int. This little hack
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72 # lets ous get around this issue
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73 return shared_x, T.cast(shared_y, 'int32')
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74
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75 test_set_x, test_set_y = shared_dataset(test_set)
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76 valid_set_x, valid_set_y = shared_dataset(valid_set)
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77 train_set_x, train_set_y = shared_dataset(train_set)
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78
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79 rval = [(train_set_x, train_set_y), (valid_set_x,valid_set_y), (test_set_x, test_set_y)]
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80 return rval
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81
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82
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83
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84
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85 def sgd_optimization_mnist(learning_rate=0.13, n_epochs=1000, dataset='../data/mnist.pkl.gz',
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86 batch_size = 600):
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87 datasets = load_data(dataset)
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88
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89 train_set_x, train_set_y = datasets[0]
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90 valid_set_x, valid_set_y = datasets[1]
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91 test_set_x , test_set_y = datasets[2]
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92
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93 # compute number of minibatches for training, validation and testing
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94 n_train_batches = train_set_x.value.shape[0] / batch_size
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95 n_valid_batches = valid_set_x.value.shape[0] / batch_size
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96 n_test_batches = test_set_x.value.shape[0] / batch_size
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97
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98
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99 ######################
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100 # BUILD ACTUAL MODEL #
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101 ######################
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102 print '... building the model'
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103
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104
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105 # allocate symbolic variables for the data
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106 index = T.lscalar() # index to a [mini]batch
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107 x = T.matrix('x') # the data is presented as rasterized images
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108 y = T.ivector('y') # the labels are presented as 1D vector of
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109 # [int] labels
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110
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111 # construct the logistic regression class
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112 # Each MNIST image has size 28*28
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113 classifier = LogisticRegression( input=x, n_in=28*28, n_out=10)
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114
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115 # the cost we minimize during training is the negative log likelihood of
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116 # the model in symbolic format
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117 cost = classifier.negative_log_likelihood(y)
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118
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119 # compiling a Theano function that computes the mistakes that are made by
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120 # the model on a minibatch
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121 test_model = theano.function(inputs = [index],
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122 outputs = classifier.errors(y),
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123 givens={
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124 x:test_set_x[index*batch_size:(index+1)*batch_size],
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125 y:test_set_y[index*batch_size:(index+1)*batch_size]})
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126
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127 validate_model = theano.function( inputs = [index],
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128 outputs = classifier.errors(y),
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129 givens={
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130 x:valid_set_x[index*batch_size:(index+1)*batch_size],
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131 y:valid_set_y[index*batch_size:(index+1)*batch_size]})
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132
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133 # compute the gradient of cost with respect to theta = (W,b)
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134 g_W = T.grad(cost = cost, wrt = classifier.W)
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135 g_b = T.grad(cost = cost, wrt = classifier.b)
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136
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137 # specify how to update the parameters of the model as a dictionary
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138 updates ={classifier.W: classifier.W - learning_rate*g_W,\
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139 classifier.b: classifier.b - learning_rate*g_b}
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140
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141 # compiling a Theano function `train_model` that returns the cost, but in
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142 # the same time updates the parameter of the model based on the rules
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143 # defined in `updates`
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144 train_model = theano.function(inputs = [index],
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145 outputs = cost,
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146 updates = updates,
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147 givens={
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148 x:train_set_x[index*batch_size:(index+1)*batch_size],
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149 y:train_set_y[index*batch_size:(index+1)*batch_size]})
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150
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151 ###############
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152 # TRAIN MODEL #
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153 ###############
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154 print '... training the model'
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155 # early-stopping parameters
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156 patience = 5000 # look as this many examples regardless
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157 patience_increase = 2 # wait this much longer when a new best is
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158 # found
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159 improvement_threshold = 0.995 # a relative improvement of this much is
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160 # considered significant
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161 validation_frequency = min(n_train_batches, patience/2)
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162 # go through this many
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163 # minibatche before checking the network
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164 # on the validation set; in this case we
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165 # check every epoch
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166
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167 best_params = None
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168 best_validation_loss = float('inf')
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169 test_score = 0.
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170 start_time = time.clock()
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171
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172 done_looping = False
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173 epoch = 0
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174 while (epoch < n_epochs) and (not done_looping):
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175 epoch = epoch + 1
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176 for minibatch_index in xrange(n_train_batches):
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177
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178 minibatch_avg_cost = train_model(minibatch_index)
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179 # iteration number
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180 iter = epoch * n_train_batches + minibatch_index
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181
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182 if (iter+1) % validation_frequency == 0:
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183 # compute zero-one loss on validation set
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184 validation_losses = [validate_model(i) for i in xrange(n_valid_batches)]
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185 this_validation_loss = numpy.mean(validation_losses)
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186
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187 print('epoch %i, minibatch %i/%i, validation error %f %%' % \
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188 (epoch, minibatch_index+1,n_train_batches, \
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189 this_validation_loss*100.))
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190
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191
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192 # if we got the best validation score until now
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193 if this_validation_loss < best_validation_loss:
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194 #improve patience if loss improvement is good enough
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195 if this_validation_loss < best_validation_loss * \
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196 improvement_threshold :
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197 patience = max(patience, iter * patience_increase)
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198
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199 best_validation_loss = this_validation_loss
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200 # test it on the test set
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201
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202 test_losses = [test_model(i) for i in xrange(n_test_batches)]
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203 test_score = numpy.mean(test_losses)
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204
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205 print((' epoch %i, minibatch %i/%i, test error of best '
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206 'model %f %%') % \
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207 (epoch, minibatch_index+1, n_train_batches,test_score*100.))
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208
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209 if patience <= iter :
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210 done_looping = True
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211 break
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212
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213 end_time = time.clock()
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214 print(('Optimization complete with best validation score of %f %%,'
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215 'with test performance %f %%') %
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216 (best_validation_loss * 100., test_score*100.))
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217 print 'The code run for %d epochs, with %f epochs/sec'%(epoch,1.*epoch/(end_time-start_time))
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218 print >> sys.stderr, ('The code for file '+os.path.split(__file__)[1]+' ran for %.1fs' % ((end_time-start_time)))
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219
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220 if __name__ == '__main__':
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221 sgd_optimization_mnist()
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222
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223