Mercurial > ift6266

annotate data_generation/pipeline/filter_nist.py @ 641:0487b8ab0961

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synched string*.bib file to the original in articles repo to have the newer ones.
author Frederic Bastien <nouiz@nouiz.org>
date Mon, 21 Mar 2011 11:28:42 -0400
parents 75dbbe409578
children
rev   line source
626
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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1 import numpy
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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2 from pylearn.io import filetensor as ft
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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3 from ift6266 import datasets
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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4 from ift6266.datasets.ftfile import FTDataSet
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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5
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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6 dataset_str = 'P07_' # NISTP # 'P07safe_'
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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7
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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8 #base_path = '/data/lisatmp/ift6266h10/data/'+dataset_str
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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9 #base_output_path = '/data/lisatmp/ift6266h10/data/transformed_digits/'+dataset_str+'train'
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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10
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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11 base_path = '/data/lisa/data/ift6266h10/data/'+dataset_str
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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12 base_output_path = '/data/lisatmp/ift6266h10/data/transformed_digits/'+dataset_str+'train'
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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13
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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14 for fileno in range(100):
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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15 print "Processing file no ", fileno
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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16
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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17 output_data_file = base_output_path+str(fileno)+'_data.ft'
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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18 output_labels_file = base_output_path+str(fileno)+'_labels.ft'
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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19
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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20 print "Reading from ",base_path+'train'+str(fileno)+'_data.ft'
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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21
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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22 dataset = lambda maxsize=None, min_file=0, max_file=100: \
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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23 FTDataSet(train_data = [base_path+'train'+str(fileno)+'_data.ft'],
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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24 train_lbl = [base_path+'train'+str(fileno)+'_labels.ft'],
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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25 test_data = [base_path+'_test_data.ft'],
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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26 test_lbl = [base_path+'_test_labels.ft'],
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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27 valid_data = [base_path+'_valid_data.ft'],
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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28 valid_lbl = [base_path+'_valid_labels.ft'])
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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29 # no conversion or scaling... keep data as is
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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30 #indtype=theano.config.floatX, inscale=255., maxsize=maxsize)
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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31
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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32 ds = dataset()
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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33
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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34 all_x = []
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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35 all_y = []
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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36
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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37 all_count = 0
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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38
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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39 for mb_x,mb_y in ds.train(1):
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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40 if mb_y[0] <= 9:
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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41 all_x.append(mb_x[0])
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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42 all_y.append(mb_y[0])
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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43
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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44 if (all_count+1) % 100000 == 0:
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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45 print "Done next 100k"
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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46
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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47 all_count += 1
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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48
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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49 # data is stored as uint8 on 0-255
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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50 merged_x = numpy.asarray(all_x, dtype=numpy.uint8)
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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51 merged_y = numpy.asarray(all_y, dtype=numpy.int32)
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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52
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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53 print "Kept", len(all_x), "(shape ", merged_x.shape, ") examples from", all_count
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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54
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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55 f = open(output_data_file, 'wb')
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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56 ft.write(f, merged_x)
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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57 f.close()
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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58
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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59 f = open(output_labels_file, 'wb')
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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60 ft.write(f, merged_y)
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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61 f.close()
75dbbe409578 Added code for deep mlp, experiment code to go along with it. Also added code I used to filter the P07 / PNIST07 datasets to keep only digits.
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62